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Nanotube deforming
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522 views
Real time nanotube deforming. The simulation is rather pointless, because the structures are unphysical (no geometry minimization). It is just a demo of flexible deformatio...
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Splash
euplotes
213 views
Simulation of collision of two water droplets.
Technical background: each droplet includes 4913 water molecules (29478 atoms in total) and has approximately 6 nm in dia...
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Nano-cannon
euplotes
278 views
Simple MD simulation.
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Protein folding
euplotes
7,004 views
(Fake) small protein folding MD simulation (it is in fact in-vacuo unfolding played in reverse). Real-time ambient occlusion was used to render the molecule.
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Diamond bearing
euplotes
924 views
Simple steered MD simulation of diamondoid nano-bearing visualized using real-time ambient occlusion.
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Nanotube T-Junction
euplotes
448 views
Construction process of a carbon nanotube double T-junction. Basically, I was keeping "Ctrl-Y" (Redo) keys combination to fast forward through the entire process. Software:...
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Atom Emitter
euplotes
275 views
Experimental implementation of atom emitter in Grand Canonical Ensemble.
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Nanocannon
euplotes
2,266 views
"Nanocannon" simulation: capped carbon nanotube filled with oxygen molecules and a C60 fullerene. Modeled after Tim Freeman's Fungimol example. Modeling, simulation and vis...
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Fullerene oscillator
euplotes
4,771 views
Molecular dynamics simulation of a C60 fullerene molecule oscillating inside a capped (10,10) carbon nanotube. Simulation time: 25ps. Temperature: 300K. Initial linear forc...
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Large molecular gear
euplotes
708 views
Molecular dynamics simulation of a large molecular gear (2084 atoms). Simulation time: 30ps. Temperature: 500K. Torque applied to one of the wheels. Modeling: NanoEngineer-...
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