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Hierarchical clustering of TCGA expression data in Gitools

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Published on Jul 15, 2014

The example shows how to cluster data in Gitools interactive heatmaps. The dendrogram is coded as color bars which give access to sub-dendrograms (subclusters) or the entire clustering tree.

To know more about hierarchical clustering in Gitools read the blog post on how to interpret the Gitools hierarchical clustering: http://bg.upf.edu/blog/2014/03/how-to...

The example data used in the video are cancer genomics data from the TCGA. In this video particularly we are clustering expression data of the cancer samples. All data is available (link below)

The application: http://www.gitools.org
The TCGA datasets: http://www.gitools.org/datasets

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