iPG Native Overview
Advaita Bioinformatics has developed iPathwayGuide to provide the greatest insight to your gene-expression data, without all the false positives that other pathway analysis packages are prone to.
iPathwayGuide is a cloud-based solution that takes gene-expression data and provides deep biological insights for genes, predicted micro RNAs, gene-ontologies, pathways, and diseases. iPathwayGuide takes gene expression data from microarrays and RNA-seq experiments including output directly from:
Affymetrix CEL files,
JMP Genomics,
CuffDiff, or DESeq
Limma or GEO2R
iPathwayGuide also feature a custom tab delimited file importer.
Unique features of iPathwayGuide include:
Gene browser with annotated relationships to Ontologies, Pathways, microRNAs, Variants, drugs, and diseases.
We also offer the ability to identify possible active microRNAs based on gene-expression signatures from your data.
Gene Ontology scoring is achieved with advanced correction factors including weight and Elim pruning methods.
Pathway are scored using Impact Analysis, which scores pathways using enrichment and topology or perturbation approaches.
The ability to model targets for drugs, microRNAs, and variants directly on the pathway is one of the unique feature offered in iPathwayGuide.
You can also easily identify diseases and disease categories with enriched annotated genes.
iPathwayGuide provides the ability to look at multiple experiments at once in a meta-analysis - allowing you to quickly identify common or unique features in your data or compare to a previous experiment.
iPathwayGuide’s intuitive interface allows for easy navigation, identification of relevant references, and downloading of images and tables for publications. Results can be easily shared with colleagues and collaborator directly from within the application simply by entering their email address.
Registration is fast, simple, and best of all iPathwayGuide is completely free to use and try. Unlike other pathway analysis software (because we believe in our software so much), we let you upload and analyze as much data as you want. Every analysis comes with a free 72-hour preview. If you don’t like what you see, it costs you nothing. But if the insights are meaningful and you wish to publish or keep your results, you only pay for the analyses you want to keep.
We also offer a variety of subscriptions packages to suit your budgets.
Try it today and unlock the secrets hidden in your data.
