Tips and Tricks for Genomic Analysis





The interactive transcript could not be loaded.


Rating is available when the video has been rented.
This feature is not available right now. Please try again later.
Published on Aug 7, 2014

In this webcast, Ashley Hintz, Field Application Scientist, will address some common topics fielded by our support team. Topics will include the following:

1.Custom Genomes
Currently SVS has a large data repository of annotation data sources from a wide variety of human, animal and plant genome assemblies. Additionally adding a custom genome to SVS has become quick and easy using our new Annotation Convert Source Wizard. We will show you how to create an allele reference sequence track using a FASTA assembly file and gene annotation track using a GTF annotation file.

2.Sample Collated Spreadsheet
Use the Build Sample Collated Spreadsheet function to create a per marker summary of your available sample information. For example if you have imported genotypes, read depths and genotype qualities for all your samples you can create a summary of those values for each sample at each marker location.

3.Activating/Inactivating Data
SVS has a variety of ways to activate or inactivate data for further analysis. We have tools available that can activate your data based on a list of markers names or based on genomic position as well as tools that can inactivate duplicate values.


When autoplay is enabled, a suggested video will automatically play next.

Up next

to add this to Watch Later

Add to

Loading playlists...