A quick tutorial on the RNA sequence structure alignment tool LocaRNA. The program computes an alignment of two or more RNA molecules. LocARNA simultaneously folds and aligns the input sequences and outputs a multiple alignment together with a consensus structure.
The program is part of the Freiburg RNA Tools ( http://rna.informatik.uni-freiburg.de ), which were developed by the Bioinformatics Group of the University of Freiburg.
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