Rotaxane
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Your version od Biodesigner looks like briliant fusion of capable interactive molecular dynamics and cleaning with simplicity and quick user eviroment. It would be great to run on linux.
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OK, I'm looking forward to release :)
The NanoEngineer-1 is not released yet as well as I know. I tryed Avogadro bud didn't intrigue me.
The most similar capabilitis of interactive molecular dynamics and optimisation has PyMOL as far I tryed. Interactive molecular dynamics is possible in VMD+NAMD, bud it's time consuming to setup. My favorite and most used aplication for input geometry preparation is Arguslab, which is however old and windows-only.
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Is this biodesigner 0.75 programed by Piotr Rotkiewicz?
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DEscription:
Molecular dynamics of a rotaxane system. A macrocycle molecule can shift along a dumbbell-shaped molecule.
Molecular modeling and simulation using Biodesigner software. Biodesigner.
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Cool... what's the name of the software that you are using?
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hello,
i tryed to download Biodesigner software
bud I didn't find any such a interactive molecular dinamics feature.
Can somebody please coment thiss?
I'm very currious about similar software for preparation of input molecular geometry for my computations
Thank's
asijahhhhhh 3 years ago
This is done using a new version of Biodesigner scheduled for release later this year. The old version on the website is very outdated. There are other free modeling programs I can recommend: NanoEngineer-1, Avogadro.
euplotes 3 years ago