The Nascent is a protein-protein physical interaction network construction tool based on gene names and sequence similarity.
Our program searches for proteins of source organism which are in physical interaction by the IntAct database.
- When the "construct by gene names" option is selected, those proteins are assigned to their respective gene names. We use these gene names to make a correspondence between the source and the target organisms making a predicted protein-protein physical interaction network for the target organism.
- When the "construct by sequence similarity" option is selected, we use protein sequence similarities to make a correspondence between the source and the target organism making a predicted protein-protein physical interaction network for the target organism.
http://nascent.pitgroup.org/
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