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1:19 FAAH in a POPC membrane ps3grid 19 views 2 weeks ago 200 nanoseconds of all-atom simulation using ACEMD
1:24 Cholesterol molecule flips between lipid bi-layers CHO:POPC 9:75 ps3grid 29 views 2 weeks ago A molecule of cholesterol is seen flipping to the opposite bilayer of POPC using ACEMD.
0:38 FAAH Anandamide binding, Version 1 ps3grid 30 views 2 weeks ago Binding of anandamide to FAAH, version 1. Entire segment of protein is shown as "New Cartoon" with coloring based on secondary structure of loops that contact anandamide. R...
0:21 Kinetic characterization of the critical step in HIV-1 protease maturation - movie-M3.mpg ps3grid 103 views 11 months ago Kinetic characterization of the critical step in HIV-1 protease maturation
0:21 Kinetic characterization of the critical step in HIV-1 protease maturation - movie-M2.mpg ps3grid 62 views 11 months ago Kinetic characterization of the critical step in HIV-1 protease maturation
1:04 Visualization and quantification of enzyme-inhibitor binding process ps3grid 2,006 views 1 year ago This video features five superimposed molecular dynamics simulations of an enzyme-inhibitor system in water: trypsin-benzamidine. During the simulations, the inhibitor is f...
1:19 Visualizing the Induced Binding of SH2-Phosphopeptide (Supporting Video 2) ps3grid 193 views 1 year ago Five superimposed trajectories showing the Ac-pYEEI peptide binding to an SH2 domain. See also http://www.youtube.com/watch?v=V0Z52u8h2es for more information. Simulatio...
1:37 Visualizing the Induced Binding of SH2-Phosphopeptide (Supporting Video 1) ps3grid 1,562 views 1 year ago You are viewing how many cellular signals propagate between proteins inside a cell. The video shows an unbiased binding simulation of phosphorilated tetrapeptide pYEEI to ...
0:21 Auto-binding of the N-terminal in the HIV-1 protease maturation process ps3grid 2,701 views 1 year ago All-atom molecular simulation (500 ns) of immature HIV-1 protease. The protease becomes mature by first binding its own N-terminal, initially connected to another protein,...
0:40 MD simulation reproduces crystallographic trypsin-benzamidine complex by free ligand binding ps3grid 1,809 views 2 years ago We performed hundreds of MD simulations of free benzamidine binding to trypsin. We have captured several events of binding reproducing the crystallographic mode (PDB 3PTB)....

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by ps3grid

Date Joined May 13, 2010

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